Pseudomonas putida BIRD-1, PPUBIRD1_1518

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppb02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppb02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF020479 UCP020479_CheW IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like 1 296 5.2E-120
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 149 282 1.14E-15
MobiDBLite mobidb-lite consensus disorder prediction - - 41 70 -
MobiDBLite mobidb-lite consensus disorder prediction - - 41 59 -
SMART SM00260 chew_2 IPR002545 CheW-like domain 146 281 4.6E-18
CDD cd00588 CheW_like - - 152 280 1.02302E-16
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 150 282 6.6E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.