Pseudomonas putida BIRD-1, PPUBIRD1_2360
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00028
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | IPR011990 | Tetratricopeptide-like helical domain superfamily | 153 | 349 | 1.2E-31 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 277 | 310 | 13.0 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 209 | 242 | 230.0 |
| Pfam | PF13181 | Tetratricopeptide repeat | IPR019734 | Tetratricopeptide repeat | 175 | 207 | 0.1 |
| PANTHER | PTHR45586 | TPR REPEAT-CONTAINING PROTEIN PA4667 | - | - | 155 | 348 | 2.5E-17 |
| SUPERFAMILY | SSF48452 | TPR-like | IPR011990 | Tetratricopeptide-like helical domain superfamily | 155 | 313 | 1.19E-27 |
| SUPERFAMILY | SSF48431 | Lipovitellin-phosvitin complex, superhelical domain | IPR011030 | Lipovitellin-phosvitin complex, superhelical domain | 40 | 274 | 1.19E-7 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 243 | 276 | 14.0 |
| Pfam | PF14559 | Tetratricopeptide repeat | - | - | 262 | 312 | 5.0E-6 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 175 | 208 | 0.013 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.