Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 1 | 85 | 2.7E-28 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 86 | 4.5E-30 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 88 | 290 | 1.41E-28 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 167 | 270 | 6.6E-40 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 113 | 288 | 6.6E-40 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 40 | 51 | 5.9E-11 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 88 | 290 | 4.8E-33 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 19 | 30 | 5.9E-11 |
Coils | Coil | Coil | - | - | 23 | 43 | - |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 3 | 88 | 1.65E-25 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 4 | 63 | 5.6E-25 |
CDD | cd08414 | PBP2_LTTR_aromatics_like | - | - | 93 | 290 | 2.78938E-44 |
PANTHER | PTHR30346 | TRANSCRIPTIONAL DUAL REGULATOR HCAR-RELATED | - | - | 3 | 290 | 2.6E-69 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 30 | 40 | 5.9E-11 |