Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 4 | 87 | 1.1E-22 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 12 | 71 | 6.9E-20 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 27 | 38 | 2.5E-10 |
CDD | cd05466 | PBP2_LTTR_substrate | - | - | 101 | 297 | 6.54155E-26 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 48 | 59 | 2.5E-10 |
Gene3D | G3DSA:3.40.190.290 | - | - | - | 102 | 301 | 2.5E-22 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 97 | 301 | 3.26E-33 |
PANTHER | PTHR30126 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 9 | 300 | 9.1E-53 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 96 | 301 | 8.3E-32 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 38 | 48 | 2.5E-10 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 8 | 87 | 5.19E-22 |