Pseudomonas putida HB3267, B479_26320 (ubiA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01040
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01474
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004659 prenyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01474
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuh01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuh00130 Ubiquinone and other terpenoid-quinone biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuh01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01474 JCVI: 4-hydroxybenzoate polyprenyltransferase IPR006370 4-hydroxybenzoate polyprenyltransferase-like 18 293 4.7E-101
PANTHER PTHR11048 PRENYLTRANSFERASES IPR039653 Prenyltransferase 12 294 8.8E-79
Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. IPR006370 4-hydroxybenzoate polyprenyltransferase-like 12 294 28.036789
CDD cd13959 PT_UbiA_COQ2 IPR039653 Prenyltransferase 23 292 1.93441E-106
Gene3D G3DSA:1.20.120.1780 UbiA prenyltransferase - - 179 296 1.9E-33
Pfam PF01040 UbiA prenyltransferase family IPR000537 UbiA prenyltransferase family 34 278 2.8E-63
FunFam G3DSA:1.10.357.140:FF:000002 4-hydroxybenzoate octaprenyltransferase - - 29 174 1.6E-63
FunFam G3DSA:1.20.120.1780:FF:000001 4-hydroxybenzoate octaprenyltransferase - - 175 296 5.3E-42
Gene3D G3DSA:1.10.357.140 UbiA prenyltransferase IPR044878 UbiA prenyltransferase superfamily 29 178 6.2E-38

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.