Pseudomonas syringae pv. syringae B728a, Psyr_2442

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0043819 precorrin-6A synthase (deacetylating) activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd11643
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009236 cobalamin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd11643
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008168 methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00590
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psb01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG psb00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR43467 COBALT-PRECORRIN-2 C(20)-METHYLTRANSFERASE - - 1 243 7.1E-41
NCBIfam TIGR02434 JCVI: precorrin-6A synthase (deacetylating) IPR012797 Precorrin-6A synthase [deacetylating] 2 250 8.4E-105
Gene3D G3DSA:3.40.1010.10 - IPR014777 Tetrapyrrole methylase, subdomain 1 1 143 6.5E-43
CDD cd11643 Precorrin-6A-synthase IPR012797 Precorrin-6A synthase [deacetylating] 6 250 0.0
Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IPR000878 Tetrapyrrole methylase 4 224 5.0E-32
PIRSF PIRSF036525 CobF IPR012797 Precorrin-6A synthase [deacetylating] 1 252 2.3E-122
Gene3D G3DSA:3.30.950.10 - IPR014776 Tetrapyrrole methylase, subdomain 2 144 252 9.3E-45
SUPERFAMILY SSF53790 Tetrapyrrole methylase IPR035996 Tetrapyrrole methylase superfamily 2 249 1.19E-37

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.