Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 1 | 84 | 2.5E-21 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 92 | 287 | 2.8E-47 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 81 | 7.0E-23 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 31 | 41 | 7.9E-7 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 91 | 294 | 2.5E-46 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 2 | 112 | 9.35E-26 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 91 | 295 | 5.43E-41 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 5 | 64 | 4.5E-19 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 164 | 268 | 2.8E-47 |
CDD | cd08412 | PBP2_PAO1_like | - | - | 94 | 291 | 1.0647E-74 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 41 | 52 | 7.9E-7 |
PANTHER | PTHR30346 | TRANSCRIPTIONAL DUAL REGULATOR HCAR-RELATED | - | - | 4 | 295 | 1.2E-64 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 20 | 31 | 7.9E-7 |