Pseudomonas syringae pv. syringae B728a, Psyr_3445
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF04347
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0044781 | bacterial-type flagellum organization |
Inferred from Sequence Model
Term mapped from: InterPro:PF04347
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psb02040 | Flagellar assembly | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR03500 | JCVI: flagellar biosynthetic protein FliO | IPR022781 | Flagellar biosynthesis protein, FliO | 48 | 115 | 3.0E-21 |
| PANTHER | PTHR38766 | FLAGELLAR PROTEIN FLIO | - | - | 38 | 144 | 2.4E-27 |
| Pfam | PF04347 | Flagellar biosynthesis protein, FliO | IPR022781 | Flagellar biosynthesis protein, FliO | 60 | 139 | 2.0E-18 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.