Pseudomonas syringae pv. syringae B728a, Psyr_3499

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0043565	sequence-specific DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00342	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00342	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00342	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF12833	Helix-turn-helix domain	IPR018060	DNA binding HTH domain, AraC-type	210	288	9.9E-19
CDD	cd06999	cupin_HpaA-like_N	IPR047264	HpaA-like, N-terminal cupin domain	9	106	4.40366E-49
PANTHER	PTHR43280	ARAC-FAMILY TRANSCRIPTIONAL REGULATOR	-	-	156	288	5.5E-24
PRINTS	PR00032	AraC bacterial regulatory protein HTH signature	IPR020449	Transcription regulator HTH, AraC- type	255	270	8.7E-6
SUPERFAMILY	SSF46689	Homeodomain-like	IPR009057	Homeobox-like domain superfamily	242	288	9.86E-11
SMART	SM00342	aracneu4	IPR018060	DNA binding HTH domain, AraC-type	203	286	1.6E-22
Gene3D	G3DSA:1.10.10.60	-	-	-	186	289	8.2E-23
PRINTS	PR00032	AraC bacterial regulatory protein HTH signature	IPR020449	Transcription regulator HTH, AraC- type	270	286	8.7E-6
SUPERFAMILY	SSF51182	RmlC-like cupins	IPR011051	RmlC-like cupin domain superfamily	37	158	9.78E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.