Pseudomonas aeruginosa PA7, PSPA7_0043

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF51126 Pectin lyase-like IPR011050 Pectin lyase fold/virulence factor 44 321 3.11E-64
NCBIfam TIGR01901 JCVI: filamentous hemagglutinin family N-terminal domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 66 163 3.2E-18
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 311 350 0.18
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 296 368 36.0
SMART SM00912 Haemagg_act_2a IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 47 168 8.7E-46
Gene3D G3DSA:2.160.20.10 - IPR012334 Pectin lyase fold 35 327 9.2E-103
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 379 418 4.0E-4
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 409 460 6.0E-7
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 440 480 4.9E-5
Pfam PF05860 TPS secretion domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 29 290 1.6E-60
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 419 449 4.7E-4

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.