Pseudomonas aeruginosa PA7, PSPA7_0256

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004888 transmembrane signaling receptor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pap02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pap02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF18947 HAMP domain IPR003660 HAMP domain 318 379 6.4E-8
Pfam PF18575 HAMP N-terminal domain 3 IPR041395 HAMP N-terminal domain 3 114 156 3.3E-18
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 407 436 4.1E-56
FunFam G3DSA:3.30.450.20:FF:000075 Methyl-accepting chemotaxis protein - - 170 289 1.2E-56
MobiDBLite mobidb-lite consensus disorder prediction - - 644 679 -
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 164 275 6.98E-6
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 513 542 4.1E-56
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 484 511 4.1E-56
SUPERFAMILY SSF58104 Methyl-accepting chemotaxis protein (MCP) signaling domain - - 353 634 1.09E-73
Coils Coil Coil - - 41 68 -
CDD cd17528 HAMP_III - - 112 155 1.26649E-15
Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 446 601 3.3E-54
Gene3D G3DSA:1.20.120.1530 - - - 1 156 2.2E-39
SMART SM00283 MA_2 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 386 633 3.2E-90
Pfam PF13188 PAS domain IPR000014 PAS domain 173 221 2.0E-5
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 561 590 4.1E-56
FunFam G3DSA:1.10.287.950:FF:000002 Methyl-accepting chemotaxis protein - - 411 636 8.2E-120
CDD cd11386 MCP_signal - - 413 604 5.93314E-58
Gene3D G3DSA:1.10.287.950 - - - 336 635 9.0E-80
Coils Coil Coil - - 590 617 -
Coils Coil Coil - - 409 429 -
Gene3D G3DSA:3.30.450.20 PAS domain - - 170 289 1.7E-42
CDD cd17529 HAMP_I - - 11 55 1.62726E-10
PANTHER PTHR43531 PROTEIN ICFG - - 95 668 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.