Pseudomonas aeruginosa PA7, PSPA7_0527 (oprM)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0042910 xenobiotic transmembrane transporter activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0427
 ECO:0000249
sequence similarity evidence used in automatic assertion		 8540696
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015562 efflux transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PA7 genes in this class
Transport of small molecules Other PA7 genes in this class
Antibiotic resistance and susceptibility Other PA7 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pap01501 beta-Lactam resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pap02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 6.0
SUPERFAMILY SSF56954 1 468 1.14E-120
TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family IPR010131 RND efflux system, outer membrane lipoprotein, NodT 9 466 0.0
Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site IPR012640 Membrane lipoprotein, lipid attachment site 1 19 5.9E-4
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 66 256 1.2E-27
Coils Coil 223 243 -
Gene3D G3DSA:2.20.200.10 103 355 0.0
Gene3D G3DSA:1.20.1600.10 57 466 0.0
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 284 464 4.2E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.