Pseudomonas aeruginosa PA7, PSPA7_2114

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00529
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.30.170 - - - 267 391 3.2E-33
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 370 385 1.6E-11
Gene3D G3DSA:1.10.287.470 Helix hairpin bin - - 142 215 1.9E-7
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 84 104 1.6E-11
Gene3D G3DSA:2.40.50.100 - - - 74 140 1.7E-10
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 265 286 1.6E-11
Coils Coil Coil - - 186 206 -
SUPERFAMILY SSF111369 HlyD-like secretion proteins - - 72 154 4.05E-8
PANTHER PTHR30386 MEMBRANE FUSION SUBUNIT OF EMRAB-TOLC MULTIDRUG EFFLUX PUMP - - 15 386 1.5E-64
Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain 74 329 6.3E-13
Pfam PF00529 Cation efflux system protein CusB domain 1 IPR043602 Cation efflux system protein CusB, domain 1 47 374 3.1E-10
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 297 321 1.6E-11
SUPERFAMILY SSF111369 HlyD-like secretion proteins - - 191 325 2.09E-10
MobiDBLite mobidb-lite consensus disorder prediction - - 1 27 -
Coils Coil Coil - - 134 175 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.