Pseudomonas aeruginosa PA7, PSPA7_5746 (rfaC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009244 lipopolysaccharide core region biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02193
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016757 transferase activity, transferring glycosyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03789
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008920 lipopolysaccharide heptosyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02193
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PA7 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pap00540 Lipopolysaccharide biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pap01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B; - - 167 349 5.9E-44
SUPERFAMILY SSF53756 UDP-Glycosyltransferase/glycogen phosphorylase - - 1 348 3.77E-84
NCBIfam TIGR02193 JCVI: lipopolysaccharide heptosyltransferase I IPR011908 Lipopolysaccharide heptosyltransferase I 2 296 6.0E-114
Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) IPR002201 Glycosyl transferase, family 9 75 314 3.8E-84
PANTHER PTHR30160 TETRAACYLDISACCHARIDE 4'-KINASE-RELATED - - 1 348 1.0E-68
CDD cd03789 GT9_LPS_heptosyltransferase IPR002201 Glycosyl transferase, family 9 2 346 3.42092E-68
FunFam G3DSA:3.40.50.2000:FF:000106 Lipopolysaccharide heptosyltransferase 1 - - 166 317 2.6E-71
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B; - - 1 163 2.2E-44

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.