Pseudomonas aeruginosa PA7, PSPA7_6128

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0043448 alkane catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5351
 ECO:0000249
sequence similarity evidence used in automatic assertion		 14574114
Molecular Function GO:0009055 electron transfer activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5351
 ECO:0000249
sequence similarity evidence used in automatic assertion		 14574114
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000071
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00301
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other PA7 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF000071 Rubredoxin IPR024922 Rubredoxin 1 55 5.5E-25
Gene3D G3DSA:2.20.28.10 - - - 1 55 6.5E-27
SUPERFAMILY SSF57802 Rubredoxin-like - - 1 53 6.73E-23
PRINTS PR00163 Rubredoxin signature IPR024935 Rubredoxin domain 3 19 5.7E-9
PANTHER PTHR47627 RUBREDOXIN - - 1 54 1.9E-18
FunFam G3DSA:2.20.28.10:FF:000001 Rubredoxin - - 1 54 3.4E-29
Pfam PF00301 Rubredoxin IPR024935 Rubredoxin domain 3 49 3.8E-23
PRINTS PR00163 Rubredoxin signature IPR024935 Rubredoxin domain 33 49 5.7E-9
CDD cd00730 rubredoxin IPR024935 Rubredoxin domain 3 52 2.72781E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.