Pseudomonas aeruginosa PA7, PSPA7_6182

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0042426 choline catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5396
 ECO:0000249
sequence similarity evidence used in automatic assertion		 17951379
Biological Process GO:0031457 glycine betaine catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5396
 ECO:0000249
sequence similarity evidence used in automatic assertion		 17951379
Molecular Function GO:0070573 metallodipeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10443
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10443
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PA7 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01244 Membrane dipeptidase (Peptidase family M19) IPR008257 Peptidase M19 3 315 3.4E-93
FunFam G3DSA:3.20.20.140:FF:000010 Membrane dipeptidase - - 1 320 0.0
PANTHER PTHR10443 MICROSOMAL DIPEPTIDASE IPR008257 Peptidase M19 22 318 1.1E-69
Gene3D G3DSA:3.20.20.140 - - - 1 320 3.7E-106
SUPERFAMILY SSF51556 Metallo-dependent hydrolases IPR032466 Metal-dependent hydrolase 5 319 3.49E-82

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.