Pseudomonas aeruginosa PA7, PSPA7_6249 (dprE2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019567 arabinose biosynthetic process
IGI
Inferred from Genetic Interaction
ECO:0000316
genetic interaction evidence used in manual assertion
21676874 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Motility & Attachment Other PA7 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 172 189 3.2E-11
Gene3D G3DSA:3.40.50.720 - - - 1 244 4.4E-45
Pfam PF00106 short chain dehydrogenase IPR002347 Short-chain dehydrogenase/reductase SDR 2 192 1.0E-33
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 2 243 1.98E-44
PANTHER PTHR44196 DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7B - - 2 242 3.0E-39
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 151 170 3.2E-11
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 125 141 3.2E-11
CDD cd05233 SDR_c - - 4 205 5.02214E-38
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 3 20 3.2E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.