Pseudomonas aeruginosa M18, PAM18_0449
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF01957 | NfeD-like C-terminal, partner-binding | IPR002810 | NfeD-like, C-terminal domain | 353 | 435 | 3.5E-10 |
| SUPERFAMILY | SSF52096 | ClpP/crotonase | IPR029045 | ClpP/crotonase-like domain superfamily | 25 | 194 | 6.55E-26 |
| CDD | cd07020 | Clp_protease_NfeD_1 | - | - | 27 | 221 | 4.851E-94 |
| SUPERFAMILY | SSF141322 | NfeD domain-like | - | - | 370 | 436 | 9.29E-8 |
| PANTHER | PTHR33507 | INNER MEMBRANE PROTEIN YBBJ | - | - | 3 | 438 | 1.2E-111 |
| Gene3D | G3DSA:3.90.226.10 | - | - | - | 20 | 247 | 1.1E-60 |
| FunFam | G3DSA:3.90.226.10:FF:000089 | Membrane-bound serine protease | - | - | 21 | 248 | 8.6E-99 |
| Gene3D | G3DSA:2.40.50.140 | - | IPR012340 | Nucleic acid-binding, OB-fold | 374 | 441 | 1.0E-8 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.