Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 87 | 9.0E-23 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 88 | 292 | 1.7E-38 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 3 | 87 | 6.99E-21 |
CDD | cd08422 | PBP2_CrgA_like | - | - | 92 | 288 | 9.74485E-70 |
Coils | Coil | Coil | - | - | 69 | 89 | - |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 4 | 62 | 1.9E-18 |
Gene3D | G3DSA:3.40.190.290 | - | - | - | 88 | 291 | 4.3E-58 |
PANTHER | PTHR30537 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 4 | 293 | 5.2E-72 |
FunFam | G3DSA:1.10.10.10:FF:000396 | LysR family transcriptional regulator | - | - | 2 | 86 | 6.2E-35 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 91 | 295 | 1.03E-39 |