Pseudomonas aeruginosa DK2, PADK2_08825

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02120
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02120
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pdk03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00482 Type II secretion system (T2SS), protein F IPR018076 Type II secretion system protein GspF domain 72 194 1.2E-28
NCBIfam TIGR02120 JCVI: type II secretion system inner membrane protein GspF IPR011850 Type II secretion system protein GspF 4 404 0.0
PRINTS PR00812 Bacterial general secretion pathway protein F signature IPR003004 GspF/PilC family 166 194 2.2E-35
Pfam PF00482 Type II secretion system (T2SS), protein F IPR018076 Type II secretion system protein GspF domain 274 396 1.1E-27
PRINTS PR00812 Bacterial general secretion pathway protein F signature IPR003004 GspF/PilC family 369 383 2.2E-35
FunFam G3DSA:1.20.81.30:FF:000001 Type II secretion system protein F - - 57 173 1.2E-36
PRINTS PR00812 Bacterial general secretion pathway protein F signature IPR003004 GspF/PilC family 67 79 2.2E-35
PANTHER PTHR30012 GENERAL SECRETION PATHWAY PROTEIN IPR003004 GspF/PilC family 1 404 1.3E-123
Gene3D G3DSA:1.20.81.30 Type II secretion system (T2SS), domain F IPR042094 Type II secretion system GspF domain superfamily 257 367 1.2E-29
Gene3D G3DSA:1.20.81.30 Type II secretion system (T2SS), domain F IPR042094 Type II secretion system GspF domain superfamily 56 173 1.6E-27
PRINTS PR00812 Bacterial general secretion pathway protein F signature IPR003004 GspF/PilC family 385 404 2.2E-35
FunFam G3DSA:1.20.81.30:FF:000001 Type II secretion system protein F - - 257 370 3.3E-32

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.