Pseudomonas aeruginosa DK2, PADK2_20020
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pdk02025 | Biofilm formation - Pseudomonas aeruginosa | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pdk02024 | Quorum sensing | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| FunFam | G3DSA:3.90.550.10:FF:000270 | Rhamnosyltransferase 2 | - | - | 12 | 214 | 0.0 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | IPR029044 | Nucleotide-diphospho-sugar transferases | 15 | 214 | 5.6E-14 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | IPR029044 | Nucleotide-diphospho-sugar transferases | 17 | 275 | 6.75E-23 |
| PANTHER | PTHR43179 | RHAMNOSYLTRANSFERASE WBBL | - | - | 3 | 286 | 4.2E-25 |
| NCBIfam | TIGR01556 | JCVI: rhamnosyltransferase | IPR006446 | Rhamnosyltransferase | 6 | 286 | 4.1E-118 |
| CDD | cd02526 | GT2_RfbF_like | - | - | 3 | 241 | 3.75658E-86 |
| Pfam | PF13641 | Glycosyltransferase like family 2 | - | - | 5 | 212 | 2.2E-6 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.