Pseudomonas aeruginosa B136-33, G655_05830

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other B136-33 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.190.10 - - - 94 290 5.8E-51
CDD cd08414 PBP2_LTTR_aromatics_like - - 94 290 2.43004E-44
PRINTS PR00039 LysR bacterial regulatory protein HTH signature IPR000847 Transcription regulator HTH, LysR 40 51 1.9E-8
Pfam PF03466 LysR substrate binding domain IPR005119 LysR, substrate-binding 88 296 3.2E-37
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 3 87 2.63E-24
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 1 85 7.1E-29
PRINTS PR00039 LysR bacterial regulatory protein HTH signature IPR000847 Transcription regulator HTH, LysR 19 30 1.9E-8
Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IPR000847 Transcription regulator HTH, LysR 4 63 1.2E-22
PANTHER PTHR30346 TRANSCRIPTIONAL DUAL REGULATOR HCAR-RELATED - - 3 299 3.6E-77
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 91 299 9.31E-31
PRINTS PR00039 LysR bacterial regulatory protein HTH signature IPR000847 Transcription regulator HTH, LysR 30 40 1.9E-8
FunFam G3DSA:1.10.10.10:FF:000001 LysR family transcriptional regulator - - 1 85 1.3E-26
Gene3D G3DSA:3.40.190.10 - - - 167 272 5.8E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.