Pseudomonas aeruginosa B136-33, G655_09750

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3007
 ECO:0000249
sequence similarity evidence used in automatic assertion		 1494343
Molecular Function GO:0004252 serine-type endopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00015
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009432 SOS response
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00015
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00726
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0045892 negative regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00015
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01726
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00726
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other B136-33 genes in this class
Adaptation, Protection Other B136-33 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00726 Repressor LexA serine protease (S24) family signature IPR006197 Peptidase S24, LexA-like 156 168 1.9E-12
Hamap MF_00015 LexA repressor [lexA]. IPR006200 Transcription regulator LexA 3 204 32.413368
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 3 70 1.7E-21
PANTHER PTHR33516 LEXA REPRESSOR - - 1 203 5.8E-56
FunFam G3DSA:1.10.10.10:FF:000009 LexA repressor - - 1 69 2.6E-33
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 1 68 1.2E-25
PRINTS PR00726 Repressor LexA serine protease (S24) family signature IPR006197 Peptidase S24, LexA-like 128 139 1.9E-12
CDD cd06529 S24_LexA-like IPR039418 LexA-like 117 193 2.14595E-21
Pfam PF01726 LexA DNA binding domain IPR006199 LexA repressor, DNA-binding domain 1 65 2.0E-31
PRINTS PR00726 Repressor LexA serine protease (S24) family signature IPR006197 Peptidase S24, LexA-like 117 127 1.9E-12
SUPERFAMILY SSF51306 LexA/Signal peptidase IPR036286 LexA/Signal peptidase-like superfamily 82 203 6.8E-36
Gene3D G3DSA:2.10.109.10 Umud Fragment, subunit A - - 81 204 2.0E-38
FunFam G3DSA:2.10.109.10:FF:000001 LexA repressor - - 81 204 2.4E-53
Pfam PF00717 Peptidase S24-like IPR015927 Peptidase S24/S26A/S26B/S26C 83 196 1.2E-30
NCBIfam TIGR00498 JCVI: transcriptional repressor LexA IPR006200 Transcription regulator LexA 1 204 2.2E-74

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.