Pseudomonas aeruginosa RP73, M062_00045

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006284 base-excision repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00624
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008725 DNA-3-methyladenine glycosylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00624
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other RP73 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG prp03410 Base excision repair 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.340.30 Hypothetical protein; domain 2 - - 1 181 2.1E-76
SUPERFAMILY SSF48150 DNA-glycosylase IPR011257 DNA glycosylase 1 181 2.2E-75
NCBIfam TIGR00624 JCVI: DNA-3-methyladenine glycosylase I IPR004597 DNA-3-methyladenine glycosylase I 3 178 7.0E-88
Pfam PF03352 Methyladenine glycosylase IPR005019 Methyladenine glycosylase 6 177 6.0E-72
FunFam G3DSA:1.10.340.30:FF:000009 DNA-3-methyladenine glycosylase I - - 1 182 1.4E-94
PANTHER PTHR30037 DNA-3-METHYLADENINE GLYCOSYLASE 1 - - 3 180 2.1E-70

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.