Pseudomonas aeruginosa RP73, M062_02425
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF028103
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.70.260 | - | - | - | 1 | 77 | 1.0E-18 |
| Gene3D | G3DSA:3.30.70.260 | - | - | - | 84 | 169 | 2.1E-24 |
| FunFam | G3DSA:3.30.70.260:FF:000084 | ACT domain-containing protein | - | - | 84 | 169 | 1.4E-57 |
| CDD | cd04869 | ACT_GcvR_2 | - | - | 90 | 169 | 5.79895E-34 |
| SUPERFAMILY | SSF55021 | ACT-like | IPR045865 | ACT-like domain | 1 | 67 | 4.2E-14 |
| Pfam | PF13740 | ACT domain | - | - | 3 | 65 | 1.8E-11 |
| Pfam | PF01842 | ACT domain | IPR002912 | ACT domain | 96 | 125 | 5.1E-7 |
| PANTHER | PTHR34875 | UPF0237 PROTEIN MJ1558 | - | - | 2 | 168 | 2.2E-49 |
| SUPERFAMILY | SSF55021 | ACT-like | IPR045865 | ACT-like domain | 87 | 168 | 1.47E-17 |
| PIRSF | PIRSF028103 | GcvR | IPR016867 | Glycine cleavage system transcriptional repressor | 1 | 171 | 4.2E-56 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.