Pseudomonas aeruginosa RP73, M062_26815

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01186
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0031460 glycine betaine transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01186
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other RP73 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG prp02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd03294 ABC_Pro_Gly_Betaine - - 4 265 0.0
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 44 191 4.1E-32
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 42 265 1.49E-73
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 52 240 3.8E-18
NCBIfam TIGR01186 JCVI: betaine/proline/choline family ABC transporter ATP-binding protein IPR005892 Glycine betaine/proline betaine transport system ATP-binding protein ProV-like 36 266 8.7E-109
PANTHER PTHR43869 GLYCINE BETAINE/PROLINE BETAINE TRANSPORT SYSTEM ATP-BINDING PROTEIN PROV - - 2 266 0.0
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 32 270 5.9E-75
FunFam G3DSA:3.40.50.300:FF:000201 Glycine betaine/L-proline ABC transporter ATP-binding protein - - 31 270 2.9E-112

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.