Pseudomonas aeruginosa 2192, PA2G_00128

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00866
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other 2192 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00866 UTRA_2 IPR011663 UbiC transcription regulator-associated 92 231 2.2E-30
Pfam PF00392 Bacterial regulatory proteins, gntR family IPR000524 Transcription regulator HTH, GntR 12 71 6.4E-19
CDD cd07377 WHTH_GntR IPR000524 Transcription regulator HTH, GntR 12 72 2.09961E-20
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 10 81 8.35E-21
SUPERFAMILY SSF64288 Chorismate lyase-like IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily 59 235 1.11E-41
FunFam G3DSA:1.10.10.10:FF:000287 Phosphonate utilization transcriptional regulator PhnR - - 6 76 4.6E-35
Pfam PF07702 UTRA domain IPR011663 UbiC transcription regulator-associated 92 230 1.0E-37
PRINTS PR00035 GntR bacterial regulatory protein HTH signature IPR000524 Transcription regulator HTH, GntR 45 61 1.1E-9
PRINTS PR00035 GntR bacterial regulatory protein HTH signature IPR000524 Transcription regulator HTH, GntR 31 45 1.1E-9
SMART SM00345 gntr3 IPR000524 Transcription regulator HTH, GntR 12 71 5.1E-19
Gene3D G3DSA:3.40.1410.10 - IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily 79 237 1.8E-35
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 3 74 1.7E-21
PANTHER PTHR44846 MANNOSYL-D-GLYCERATE TRANSPORT/METABOLISM SYSTEM REPRESSOR MNGR-RELATED - - 1 235 1.3E-53

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.