Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0022857 | transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | pen01503 | Cationic antimicrobial peptide (CAMP) resistance | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pen01501 | beta-Lactam resistance | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:2.40.50.100 | - | - | - | 61 | 191 | 9.2E-66 |
Pfam | PF00529 | Cation efflux system protein CusB domain 1 | IPR043602 | Cation efflux system protein CusB, domain 1 | 35 | 344 | 7.6E-9 |
NCBIfam | TIGR01730 | JCVI: efflux RND transporter periplasmic adaptor subunit | IPR006143 | RND efflux pump, membrane fusion protein | 37 | 359 | 1.5E-76 |
Coils | Coil | Coil | - | - | 102 | 153 | - |
MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 364 | 384 | - |
Gene3D | G3DSA:2.40.30.170 | - | - | - | 55 | 267 | 9.2E-66 |
SUPERFAMILY | SSF111369 | HlyD-like secretion proteins | - | - | 48 | 284 | 1.57E-93 |
Gene3D | G3DSA:2.40.420.20 | - | - | - | 268 | 360 | 5.5E-21 |
Pfam | PF16576 | Barrel-sandwich domain of CusB or HlyD membrane-fusion | IPR032317 | RND efflux pump, membrane fusion protein, barrel-sandwich domain | 60 | 277 | 8.1E-15 |
Gene3D | G3DSA:1.10.287.470 | Helix hairpin bin | - | - | 96 | 155 | 9.2E-66 |
FunFam | G3DSA:2.40.420.20:FF:000001 | Efflux RND transporter periplasmic adaptor subunit | - | - | 268 | 360 | 2.0E-29 |
PANTHER | PTHR30158 | ACRA/E-RELATED COMPONENT OF DRUG EFFLUX TRANSPORTER | - | - | 5 | 368 | 3.7E-124 |
FunFam | G3DSA:2.40.30.170:FF:000001 | Multidrug resistance efflux transporter MdtE | - | - | 181 | 268 | 4.1E-34 |