Pseudomonas entomophila L48, PSEEN5427 (rpmB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00373
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:2.30.170.40
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00373
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pen03010 Ribosome 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR13528 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL IPR026569 Large ribosomal subunit protein bL28 1 70 1.0E-21
FunFam G3DSA:2.30.170.40:FF:000001 50S ribosomal protein L28 - - 2 78 4.5E-43
Gene3D G3DSA:2.30.170.40 Ribosomal protein L28/L24 IPR037147 Large ribosomal subunit protein bL28 superfamily 2 78 5.4E-35
NCBIfam TIGR00009 JCVI: 50S ribosomal protein L28 IPR001383 Large ribosomal subunit protein bL28, bacterial-type 1 58 1.2E-28
MobiDBLite mobidb-lite consensus disorder prediction - - 1 20 -
Hamap MF_00373 50S ribosomal protein L28 [rpmB]. IPR001383 Large ribosomal subunit protein bL28, bacterial-type 1 67 22.201672
Pfam PF00830 Ribosomal L28 family IPR026569 Large ribosomal subunit protein bL28 3 61 2.1E-28
SUPERFAMILY SSF143800 L28p-like IPR034704 Large ribosomal subunit protein bL28/bL31-like superfamily 2 77 1.31E-31

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.