Pseudomonas stutzeri A1501, PST_2156

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01562
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF04216 Protein involved in formate dehydrogenase formation IPR006452 Formate dehydrogenase accessory protein 22 311 1.3E-91
Gene3D G3DSA:3.90.1670.10 - IPR024064 FdhE-like superfamily 23 315 6.5E-72
NCBIfam TIGR01562 JCVI: formate dehydrogenase accessory protein FdhE IPR006452 Formate dehydrogenase accessory protein 20 312 4.7E-69
PANTHER PTHR37689 PROTEIN FDHE IPR006452 Formate dehydrogenase accessory protein 18 312 1.7E-60
CDD cd16341 FdhE IPR006452 Formate dehydrogenase accessory protein 52 300 1.64194E-66
SUPERFAMILY SSF144020 FdhE-like IPR024064 FdhE-like superfamily 26 314 3.01E-73
MobiDBLite mobidb-lite consensus disorder prediction - - 1 21 -
PIRSF PIRSF018296 Format_dh_formtn_FdhE IPR006452 Formate dehydrogenase accessory protein 7 315 3.4E-76

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.