Pseudomonas stutzeri A1501, PST_3902

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00474
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00474
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00474
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1730.10 Sodium/glucose cotransporter IPR038377 Sodium/glucose symporter superfamily 21 582 2.3E-93
NCBIfam TIGR03648 JCVI: VC_2705 family sodium/solute symporter IPR019899 Sodium/solute symporter, VC2705 subfamily 8 580 0.0
CDD cd11480 SLC5sbd_u4 - - 6 562 0.0
PANTHER PTHR48086 SODIUM/PROLINE SYMPORTER-RELATED - - 5 581 0.0
Pfam PF00474 Sodium:solute symporter family IPR001734 Sodium/solute symporter 370 505 2.0E-16
Pfam PF00474 Sodium:solute symporter family IPR001734 Sodium/solute symporter 33 294 4.7E-36

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.