Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_1604 (acd)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.540.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.540.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psz01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psz01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psz01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psz00280 Valine, leucine and isoleucine degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psz01212 Fatty acid metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psz00410 beta-Alanine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psz01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psz00071 Fatty acid degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psz00640 Propanoate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.140.10 - - - 243 389 4.6E-38
Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal 13 122 2.7E-26
PANTHER PTHR48083 MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED - - 13 388 1.2E-89
PIRSF PIRSF016578 PIGM - - 130 201 0.35
PIRSF PIRSF016578 PIGM - - 1 105 5.3E-5
Gene3D G3DSA:2.40.110.10 - IPR046373 Acyl-CoA oxidase/dehydrogenase, middle domain superfamily 127 242 5.2E-32
Gene3D G3DSA:1.10.540.10 - IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily 2 123 2.8E-29
FunFam G3DSA:2.40.110.10:FF:000014 Probable acyl-CoA dehydrogenase - - 126 242 9.1E-60
PIRSF PIRSF016578 PIGM - - 242 390 5.0E-7
FunFam G3DSA:1.10.540.10:FF:000013 Acyl-CoA dehydrogenase - - 7 123 1.2E-52
FunFam G3DSA:1.20.140.10:FF:000012 Acyl-CoA dehydrogenase fadE12 - - 243 389 2.1E-73
Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPR009075 Acyl-CoA dehydrogenase/oxidase, C-terminal 238 371 7.4E-36
SUPERFAMILY SSF56645 Acyl-CoA dehydrogenase NM domain-like IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily 11 250 1.7E-61
SUPERFAMILY SSF47203 Acyl-CoA dehydrogenase C-terminal domain-like IPR036250 Acyl-CoA dehydrogenase-like, C-terminal 236 391 9.83E-44
Pfam PF02770 Acyl-CoA dehydrogenase, middle domain IPR006091 Acyl-CoA oxidase/dehydrogenase, middle domain 127 225 6.0E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.