Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0005524 | ATP binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00270
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003724 | RNA helicase activity |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00968
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0042255 | ribosome assembly |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00968
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003676 | nucleic acid binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00270
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | psz03018 | RNA degradation | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
CDD | cd00268 | DEADc | - | - | 12 | 213 | 1.59007E-98 |
Pfam | PF00270 | DEAD/DEAH box helicase | IPR011545 | DEAD/DEAH box helicase domain | 25 | 201 | 1.9E-45 |
Gene3D | G3DSA:3.40.50.300 | - | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 1 | 215 | 2.5E-74 |
FunFam | G3DSA:3.40.50.300:FF:000468 | ATP-dependent RNA helicase RhlE | - | - | 218 | 399 | 1.8E-92 |
PANTHER | PTHR47959 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED | - | - | 2 | 566 | 0.0 |
Pfam | PF00271 | Helicase conserved C-terminal domain | IPR001650 | Helicase, C-terminal | 238 | 344 | 5.7E-27 |
Gene3D | G3DSA:3.40.50.300 | - | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 218 | 447 | 4.8E-51 |
Hamap | MF_00968 | ATP-dependent RNA helicase RhlE [rhlE]. | IPR028622 | ATP-dependent RNA helicase RhlE | 1 | 542 | 48.74329 |
CDD | cd18787 | SF2_C_DEAD | - | - | 224 | 353 | 2.38062E-60 |
FunFam | G3DSA:3.40.50.300:FF:000108 | ATP-dependent RNA helicase RhlE | - | - | 1 | 215 | 7.2E-90 |
SMART | SM00490 | helicmild6 | IPR001650 | Helicase, C-terminal | 263 | 344 | 5.7E-32 |
SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 24 | 102 | 7.43E-6 |
SMART | SM00487 | ultradead3 | IPR014001 | Helicase superfamily 1/2, ATP-binding domain | 20 | 227 | 2.0E-61 |
SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 79 | 362 | 7.9E-72 |
MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 537 | 579 | - |
MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 385 | 605 | - |
MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 386 | 438 | - |