Pseudomonas stutzeri DSM 4166, PSTAA_1383 (nifS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0031071 cysteine desulfurase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006520 cellular amino acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psr04122 Sulfur relay system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psr01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psr00730 Thiamine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc [2Fe-2S] iron-sulfur cluster biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF005572 NifS IPR016454 Cysteine desulfurase 1 381 3.6E-124
SUPERFAMILY SSF53383 PLP-dependent transferases IPR015424 Pyridoxal phosphate-dependent transferase 4 373 5.79E-98
Gene3D G3DSA:1.10.260.50 - - - 15 279 0.0
Pfam PF00266 Aminotransferase class-V IPR000192 Aminotransferase class V domain 4 366 5.0E-86
Gene3D G3DSA:3.40.640.10 - IPR015421 Pyridoxal phosphate-dependent transferase, major domain 61 235 0.0
Gene3D G3DSA:3.90.1150.10 Aspartate Aminotransferase, domain 1 IPR015422 Pyridoxal phosphate-dependent transferase, small domain 4 369 0.0
NCBIfam TIGR03402 JCVI: cysteine desulfurase NifS IPR017772 Cysteine desulfurase NifS, bacterial/archaeal 4 383 0.0
FunFam G3DSA:3.40.640.10:FF:000084 IscS-like cysteine desulfurase - - 62 235 6.3E-75
PANTHER PTHR11601 CYSTEINE DESULFURYLASE FAMILY MEMBER - - 4 380 2.3E-126

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.