Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PANTHER | PTHR30537 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 8 | 293 | 3.2E-60 |
CDD | cd08482 | PBP2_TrpI | IPR037418 | HTH-type transcriptional regulator TrpI, PBP2 | 95 | 289 | 5.17223E-96 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 23 | 34 | 1.5E-7 |
Coils | Coil | Coil | - | - | 113 | 133 | - |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 44 | 55 | 1.5E-7 |
FunFam | G3DSA:1.10.10.10:FF:000038 | Glycine cleavage system transcriptional activator | - | - | 5 | 89 | 1.0E-29 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 85 | 294 | 2.71E-26 |
FunFam | G3DSA:3.40.190.10:FF:000017 | Glycine cleavage system transcriptional activator | - | - | 165 | 264 | 6.6E-28 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 179 | 262 | 2.5E-25 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 4 | 86 | 8.0E-24 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 3 | 87 | 1.36E-22 |
Coils | Coil | Coil | - | - | 70 | 90 | - |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 8 | 66 | 8.2E-21 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 34 | 44 | 1.5E-7 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 87 | 178 | 3.2E-10 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 96 | 293 | 1.8E-22 |