Pseudomonas stutzeri DSM 4166, PSTAA_3269
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF00529
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.40.30.170 | - | - | - | 254 | 370 | 2.4E-33 |
| Gene3D | G3DSA:2.40.50.100 | - | - | - | 75 | 141 | 1.4E-8 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1 | 29 | - |
| SUPERFAMILY | SSF111369 | HlyD-like secretion proteins | - | - | 217 | 312 | 1.83E-9 |
| Gene3D | G3DSA:1.10.287.470 | Helix hairpin bin | - | - | 142 | 209 | 7.9E-7 |
| Coils | Coil | Coil | - | - | 114 | 134 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1 | 17 | - |
| Coils | Coil | Coil | - | - | 151 | 172 | - |
| Pfam | PF16576 | Barrel-sandwich domain of CusB or HlyD membrane-fusion | IPR032317 | RND efflux pump, membrane fusion protein, barrel-sandwich domain | 73 | 316 | 1.2E-14 |
| SUPERFAMILY | SSF111369 | HlyD-like secretion proteins | - | - | 76 | 140 | 4.58E-8 |
| PANTHER | PTHR30386 | MEMBRANE FUSION SUBUNIT OF EMRAB-TOLC MULTIDRUG EFFLUX PUMP | - | - | 20 | 368 | 6.0E-59 |
| Coils | Coil | Coil | - | - | 187 | 207 | - |
| Pfam | PF00529 | Cation efflux system protein CusB domain 1 | IPR043602 | Cation efflux system protein CusB, domain 1 | 317 | 361 | 2.3E-6 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.