Pseudomonas stutzeri DSM 4166, PSTAA_3952

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 367 410 5.7E-8
SUPERFAMILY SSF55073 IPR029787 Nucleotide cyclase 247 416 1.1E-39
MobiDBLite mobidb-lite consensus disorder prediction 350 370 -
TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 241 414 7.7E-35
CDD cd01949 GGDEF IPR000160 GGDEF domain 243 413 2.61511E-43
SMART SM00267 IPR000160 GGDEF domain 230 415 3.6E-45
ProSiteProfiles PS50887 GGDEF domain profile. IPR000160 GGDEF domain 265 417 27.777
Coils Coil 333 353 -
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 242 347 4.7E-23
Gene3D G3DSA:3.30.70.270 234 416 6.6E-50

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.