Pseudomonas stutzeri DSM 4166, PSTAA_3978

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00065
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 902 1010 1.8E-17
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 492 559 1.8E-16
Pfam PF13185 GAF domain IPR003018 GAF domain 253 386 4.8E-14
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 491 559 4.2E-19
FunFam G3DSA:3.30.565.10:FF:000010 Sensor histidine kinase RcsC - - 558 720 4.5E-49
SMART SM00065 gaf_1 IPR003018 GAF domain 252 395 5.1E-8
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 492 555 4.57364E-13
MobiDBLite mobidb-lite consensus disorder prediction - - 418 448 -
Gene3D G3DSA:1.10.287.130 - - - 458 557 1.2E-25
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 702 715 6.3E-17
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 606 716 5.1E-29
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 900 1014 1.9E-15
Gene3D G3DSA:3.30.450.40 - IPR029016 GAF-like domain superfamily 224 397 2.8E-19
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 778 888 5.2E-17
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1048 1160 8.1E-28
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 558 720 4.2E-49
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 606 718 4.9E-39
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 678 696 6.3E-17
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 780 886 2.1E-16
Gene3D G3DSA:3.40.50.2300 - - - 898 1045 3.3E-22
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1046 1160 1.9E-37
CDD cd00156 REC - - 903 1002 5.44245E-18
Pfam PF05227 CHASE3 domain IPR007891 CHASE3 44 177 5.8E-31
Coils Coil Coil - - 387 488 -
Gene3D G3DSA:3.40.50.2300 - - - 780 897 2.5E-23
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1044 1166 1.29E-38
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1048 1160 8.50943E-39
CDD cd16922 HATPase_EvgS-ArcB-TorS-like - - 611 715 1.05523E-53
CDD cd19410 HK9-like_sensor - - 55 170 3.25326E-24
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 477 560 7.65E-21
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 643 657 6.3E-17
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 900 1021 1.37E-22
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 548 720 1.23E-46
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 661 671 6.3E-17
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 777 893 1.41E-23
SUPERFAMILY SSF55781 GAF domain-like - - 222 386 1.99E-21
PANTHER PTHR45339 HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J - - 413 960 0.0
Gene3D G3DSA:3.40.50.2300 - - - 1046 1170 1.5E-42
MobiDBLite mobidb-lite consensus disorder prediction - - 418 442 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.