Pseudomonas stutzeri CCUG 29243, A458_07845
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF02743 | Cache domain | IPR033479 | Double Cache domain 1 | 40 | 263 | 5.1E-14 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 362 | 512 | 8.50592E-59 |
| CDD | cd12912 | PDC2_MCP_like | - | - | 194 | 268 | 5.05027E-12 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 237 | 514 | 1.6E-62 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 357 | 513 | 5.9E-41 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 30 | 175 | 3.0E-13 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 366 | 513 | 4.94E-43 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 350 | 514 | 1.5E-57 |
| CDD | cd18773 | PDC1_HK_sensor | - | - | 60 | 177 | 1.9683E-8 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 356 | 514 | 2.5E-45 |
| SUPERFAMILY | SSF103190 | Sensory domain-like | IPR029151 | Periplasmic sensor-like domain superfamily | 186 | 262 | 5.89E-13 |
| Gene3D | G3DSA:6.10.340.10 | - | - | - | 262 | 355 | 3.3E-5 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 362 | 510 | 2.6E-40 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 356 | 515 | 5.2E-49 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.