Pseudomonas stutzeri CCUG 29243, A458_08995

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015969 guanosine tetraphosphate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04607
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psc00230 Purine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.70.260 - - - 666 746 3.7E-18
CDD cd04876 ACT_RelA-SpoT - - 672 743 8.02373E-21
SUPERFAMILY SSF55021 ACT-like IPR045865 ACT-like domain 666 743 1.96E-15
SUPERFAMILY SSF109604 HD-domain/PDEase-like - - 18 218 7.53E-49
Pfam PF13291 ACT domain IPR002912 ACT domain 665 743 6.1E-18
Pfam PF02824 TGS domain IPR004095 TGS 416 475 7.4E-22
CDD cd01668 TGS_RSH IPR033655 RelA/SpoT, TGS domain 417 475 6.28237E-34
Gene3D G3DSA:3.10.20.30 - IPR012675 Beta-grasp domain superfamily 409 483 2.8E-32
SUPERFAMILY SSF81271 TGS-like IPR012676 TGS-like 408 476 2.83E-22
FunFam G3DSA:3.10.20.30:FF:000002 GTP pyrophosphokinase (RelA/SpoT) - - 409 482 2.8E-32
Coils Coil Coil - - 37 57 -
CDD cd05399 NT_Rel-Spo_like IPR007685 RelA/SpoT 237 360 1.24659E-37
Pfam PF13328 HD domain - - 40 202 1.5E-43
SUPERFAMILY SSF81301 Nucleotidyltransferase IPR043519 Nucleotidyltransferase superfamily 207 420 1.41E-63
Gene3D G3DSA:1.10.3210.10 Hypothetical protein af1432 - - 12 218 9.4E-45
Pfam PF04607 Region found in RelA / SpoT proteins IPR007685 RelA/SpoT 262 370 4.3E-38
FunFam G3DSA:3.30.460.10:FF:000001 GTP pyrophosphokinase RelA - - 219 352 9.3E-59
Gene3D G3DSA:3.30.460.10 Beta Polymerase, domain 2 IPR043519 Nucleotidyltransferase superfamily 219 352 1.7E-49
PANTHER PTHR21262 GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE - - 23 743 0.0
NCBIfam TIGR00691 JCVI: RelA/SpoT family protein IPR004811 RelA/SpoT family 69 743 0.0
Pfam PF19296 RelA/SpoT, AH and RIS domains IPR045600 RelA/SpoT, AH and RIS domains 494 643 1.2E-5
SMART SM00954 RelA_SpoT_2 IPR007685 RelA/SpoT 262 372 1.9E-66

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.