Pseudomonas stutzeri CCUG 29243, A458_14825 (purN)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0004644 | phosphoribosylglycinamide formyltransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00639
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0009058 | biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF00551
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006189 | 'de novo' IMP biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00639
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psc01130 | Biosynthesis of antibiotics | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| KEGG | psc01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | psc01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | psc00230 | Purine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | 5-aminoimidazole ribonucleotide biosynthesis I | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| KEGG | psc00670 | One carbon pool by folate | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.40.50.170 | - | - | - | 1 | 207 | 2.5E-74 |
| Hamap | MF_01930 | Phosphoribosylglycinamide formyltransferase [purN]. | IPR004607 | Phosphoribosylglycinamide formyltransferase | 6 | 190 | 31.144716 |
| Pfam | PF00551 | Formyl transferase | IPR002376 | Formyl transferase, N-terminal | 6 | 183 | 4.9E-61 |
| NCBIfam | TIGR00639 | JCVI: phosphoribosylglycinamide formyltransferase | IPR004607 | Phosphoribosylglycinamide formyltransferase | 6 | 193 | 9.8E-76 |
| SUPERFAMILY | SSF53328 | Formyltransferase | IPR036477 | Formyl transferase, N-terminal domain superfamily | 6 | 202 | 1.02E-64 |
| CDD | cd08645 | FMT_core_GART | IPR004607 | Phosphoribosylglycinamide formyltransferase | 6 | 187 | 3.79622E-101 |
| PANTHER | PTHR43369 | PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE | - | - | 1 | 201 | 5.4E-61 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.