Pseudomonas stutzeri RCH2, Psest_0125

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016887	ATPase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF07724	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF07724	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	psh03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	psh02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Coils	Coil	Coil	-	-	417	437	-
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	601	619	7.2E-33
SMART	SM01086	ClpB_D2_small_2	IPR019489	Clp ATPase, C-terminal	768	860	0.0021
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	208	338	4.5E-9
NCBIfam	TIGR03345	JCVI: type VI secretion system ATPase TssH	IPR017729	AAA+ ATPase ClpV1	13	851	0.0
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	773	839	2.1E-7
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	166	506	5.83E-70
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	708	722	7.2E-33
Coils	Coil	Coil	-	-	563	583	-
Coils	Coil	Coil	-	-	449	469	-
Coils	Coil	Coil	-	-	503	523	-
Gene3D	G3DSA:1.10.1780.10	-	IPR036628	Clp, N-terminal domain superfamily	5	152	2.0E-23
FunFam	G3DSA:3.40.50.300:FF:000010	Chaperone clpB 1, putative	-	-	155	347	6.2E-83
FunFam	G3DSA:3.40.50.300:FF:000025	ATP-dependent Clp protease subunit	-	-	550	766	3.1E-81
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	546	833	4.68E-53
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	348	544	1.4E-45
CDD	cd00009	AAA	-	-	188	339	6.15111E-12
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	646	664	7.2E-33
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	597	762	1.7E-42
Gene3D	G3DSA:1.10.8.60	-	-	-	770	862	2.1E-6
PANTHER	PTHR11638	ATP-DEPENDENT CLP PROTEASE	-	-	24	841	0.0
SUPERFAMILY	SSF81923	Double Clp-N motif	IPR036628	Clp, N-terminal domain superfamily	19	130	4.12E-11
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	550	766	2.2E-67
CDD	cd19499	RecA-like_ClpB_Hsp104-like	-	-	565	766	1.28164E-83
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	203	348	8.1E-11
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	347	438	1.2E-28
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	675	693	7.2E-33
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	597	756	1.4E-9
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	156	347	3.0E-69

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.