Pseudomonas stutzeri RCH2, Psest_0451
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016757 | transferase activity, transferring glycosyl groups |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02195
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0009103 | lipopolysaccharide biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02195
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psh01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | psh00540 | Lipopolysaccharide biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | - | - | 1 | 338 | 3.3E-100 |
| Pfam | PF01075 | Glycosyltransferase family 9 (heptosyltransferase) | IPR002201 | Glycosyl transferase, family 9 | 69 | 317 | 1.8E-84 |
| NCBIfam | TIGR02195 | JCVI: lipopolysaccharide heptosyltransferase II | IPR011910 | ADP-heptose--LPS heptosyltransferase 2 | 2 | 337 | 0.0 |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | - | - | 2 | 144 | 7.0E-36 |
| CDD | cd03789 | GT9_LPS_heptosyltransferase | IPR002201 | Glycosyl transferase, family 9 | 2 | 335 | 1.94686E-84 |
| PANTHER | PTHR30160 | TETRAACYLDISACCHARIDE 4'-KINASE-RELATED | - | - | 1 | 339 | 3.6E-76 |
| FunFam | G3DSA:3.40.50.2000:FF:000022 | ADP-heptose--LPS heptosyltransferase II | - | - | 2 | 146 | 4.0E-76 |
| Coils | Coil | Coil | - | - | 344 | 344 | - |
| FunFam | G3DSA:3.40.50.2000:FF:000023 | ADP-heptose--LPS heptosyltransferase II | - | - | 159 | 338 | 9.4E-72 |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | - | - | 158 | 339 | 2.5E-54 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.