Pseudomonas stutzeri RCH2, Psest_0748
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0008270 | zinc ion binding |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00926
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Hamap | MF_00926 | RNA polymerase-binding transcription factor DksA [dksA]. | IPR012784 | RNA polymerase-binding transcription factor DksA | 11 | 132 | 25.318211 |
| Gene3D | G3DSA:1.20.120.910 | - | - | - | 1 | 134 | 1.7E-36 |
| SUPERFAMILY | SSF109635 | DnaK suppressor protein DksA, alpha-hairpin domain | IPR037187 | DksA, N-terminal domain superfamily | 2 | 92 | 6.54E-24 |
| PANTHER | PTHR33823 | RNA POLYMERASE-BINDING TRANSCRIPTION FACTOR DKSA-RELATED | - | - | 15 | 132 | 2.0E-27 |
| NCBIfam | TIGR02420 | JCVI: RNA polymerase-binding protein DksA | IPR012784 | RNA polymerase-binding transcription factor DksA | 15 | 123 | 4.5E-36 |
| SUPERFAMILY | SSF57716 | Glucocorticoid receptor-like (DNA-binding domain) | - | - | 93 | 131 | 1.43E-7 |
| Pfam | PF01258 | Prokaryotic dksA/traR C4-type zinc finger | IPR000962 | Zinc finger, DksA/TraR C4-type | 91 | 126 | 1.9E-9 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.