Pseudomonas stutzeri RCH2, Psest_1627

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00270
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00270
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00270 DEAD/DEAH box helicase IPR011545 DEAD/DEAH box helicase domain 24 186 8.0E-46
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 1 208 5.2E-69
SMART SM00487 ultradead3 IPR014001 Helicase superfamily 1/2, ATP-binding domain 19 221 3.5E-50
SMART SM00490 helicmild6 IPR001650 Helicase, C-terminal 257 338 2.6E-32
Pfam PF00271 Helicase conserved C-terminal domain IPR001650 Helicase, C-terminal 237 338 3.7E-28
CDD cd00268 DEADc - - 11 206 2.16288E-84
CDD cd18787 SF2_C_DEAD - - 218 347 1.59586E-56
MobiDBLite mobidb-lite consensus disorder prediction - - 377 443 -
MobiDBLite mobidb-lite consensus disorder prediction - - 391 406 -
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 71 359 6.41E-70
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 213 427 1.9E-48
PANTHER PTHR47959 ATP-DEPENDENT RNA HELICASE RHLE-RELATED - - 2 388 2.3E-119

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.