Pseudomonas stutzeri RCH2, Psest_3852
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psh02024 | Quorum sensing | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | psh02010 | ABC transporters | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR30483 | LEUCINE-SPECIFIC-BINDING PROTEIN | - | - | 2 | 385 | 8.4E-76 |
| Pfam | PF13458 | Periplasmic binding protein | IPR028081 | Leucine-binding protein domain | 27 | 364 | 4.3E-84 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 147 | 279 | 1.5E-105 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 28 | 331 | 1.5E-105 |
| CDD | cd06327 | PBP1_SBP-like | - | - | 29 | 364 | 0.0 |
| SUPERFAMILY | SSF53822 | Periplasmic binding protein-like I | IPR028082 | Periplasmic binding protein-like I | 28 | 398 | 1.18E-86 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.