Pseudomonas stutzeri RCH2, Psest_4327
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0015990 | electron transport coupled proton transport |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02891
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10422
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0009060 | aerobic respiration |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10422
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0045277 | respiratory chain complex IV |
Inferred from Sequence Model
Term mapped from: InterPro:cd01663
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0020037 | heme binding |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10422
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0004129 | cytochrome-c oxidase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10422
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psh01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | aerobic respiration I (cytochrome c) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| KEGG | psh00190 | Oxidative phosphorylation | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | aerobic respiration II (cytochrome c) (yeast) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | Fe(II) oxidation | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | arsenite oxidation I (respiratory) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 385 | 404 | 9.3E-123 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 528 | 545 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1 | 21 | - |
| CDD | cd01663 | Cyt_c_Oxidase_I | IPR033944 | Cytochrome c oxidase subunit I domain | 30 | 514 | 0.0 |
| NCBIfam | TIGR02891 | JCVI: cytochrome c oxidase subunit I | IPR014241 | Cytochrome c oxidase, subunit I bacterial type | 26 | 527 | 0.0 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 142 | 154 | 9.3E-123 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 322 | 343 | 9.3E-123 |
| SUPERFAMILY | SSF81442 | Cytochrome c oxidase subunit I-like | IPR036927 | Cytochrome c oxidase-like, subunit I superfamily | 23 | 529 | 0.0 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 72 | 95 | 9.3E-123 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 357 | 375 | 9.3E-123 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 172 | 190 | 9.3E-123 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 523 | 545 | - |
| Pfam | PF00115 | Cytochrome C and Quinol oxidase polypeptide I | IPR000883 | Cytochrome c oxidase subunit I | 34 | 477 | 0.0 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 435 | 456 | 9.3E-123 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 298 | 313 | 9.3E-123 |
| Gene3D | G3DSA:1.20.210.10 | - | IPR036927 | Cytochrome c oxidase-like, subunit I superfamily | 12 | 533 | 0.0 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 99 | 123 | 9.3E-123 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 201 | 220 | 9.3E-123 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 252 | 273 | 9.3E-123 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 25 | 50 | 9.3E-123 |
| FunFam | G3DSA:1.20.210.10:FF:000004 | Cytochrome c oxidase subunit 1 | - | - | 14 | 530 | 0.0 |
| PANTHER | PTHR10422 | CYTOCHROME C OXIDASE SUBUNIT 1 | IPR000883 | Cytochrome c oxidase subunit I | 23 | 531 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.