Pseudomonas mendocina NK-01, MDS_0654
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016757 | transferase activity, transferring glycosyl groups |
Inferred from Sequence Model
Term mapped from: InterPro:PF00534
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pmk00540 | Lipopolysaccharide biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pmk01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR45947 | SULFOQUINOVOSYL TRANSFERASE SQD2 | - | - | 150 | 366 | 3.6E-15 |
| CDD | cd03801 | GT4_PimA-like | - | - | 3 | 359 | 3.06678E-46 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | - | - | 4 | 360 | 3.98E-62 |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | - | - | 170 | 335 | 8.9E-123 |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | - | - | 9 | 169 | 8.9E-123 |
| Pfam | PF00534 | Glycosyl transferases group 1 | IPR001296 | Glycosyl transferase, family 1 | 185 | 348 | 1.4E-32 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.