Pseudomonas mendocina NK-01, MDS_0808

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006413	translational initiation	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF55159	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003743	translation initiation factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF037511	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR12789	DENSITY-REGULATED PROTEIN HOMOLOG	-	-	47	113	1.7E-11
NCBIfam	TIGR01158	JCVI: stress response translation initiation inhibitor YciH	IPR005872	Archaeal/bacterial translation initiation factor SUI1	14	123	4.5E-36
FunFam	G3DSA:3.30.780.10:FF:000002	Stress response translation initiation inhibitor	-	-	43	123	1.5E-31
SUPERFAMILY	SSF55159	eIF1-like	IPR036877	SUI1 domain superfamily	13	120	5.1E-28
CDD	cd11567	YciH_like	IPR005872	Archaeal/bacterial translation initiation factor SUI1	46	121	3.7948E-33
Pfam	PF01253	Translation initiation factor SUI1	IPR001950	SUI1 domain	49	116	6.1E-16
PIRSF	PIRSF037511	Transl_init_SUI1_prok	IPR005872	Archaeal/bacterial translation initiation factor SUI1	1	123	1.7E-46
Gene3D	G3DSA:3.30.780.10	-	-	-	43	123	4.0E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.