Pseudomonas mendocina NK-01, MDS_0920

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF08361	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pmk01501	beta-Lactam resistance	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.10.357.10	Tetracycline Repressor, domain 2	-	-	1	206	7.9E-78
PRINTS	PR00455	TetR bacterial regulatory protein HTH signature	IPR001647	DNA-binding HTH domain, TetR-type	36	59	4.1E-12
PRINTS	PR00455	TetR bacterial regulatory protein HTH signature	IPR001647	DNA-binding HTH domain, TetR-type	15	28	4.1E-12
Pfam	PF08361	MAATS-type transcriptional repressor, C-terminal region	IPR013572	Transcription regulator MAATS, C-terminal	85	199	2.2E-14
SUPERFAMILY	SSF46689	Homeodomain-like	IPR009057	Homeobox-like domain superfamily	1	66	5.13E-19
SUPERFAMILY	SSF48498	Tetracyclin repressor-like, C-terminal domain	IPR036271	Tetracyclin repressor-like, C-terminal domain superfamily	84	202	1.19E-9
FunFam	G3DSA:1.10.10.60:FF:000141	TetR family transcriptional regulator	-	-	8	59	7.7E-16
Pfam	PF00440	Bacterial regulatory proteins, tetR family	IPR001647	DNA-binding HTH domain, TetR-type	15	61	4.6E-18
PANTHER	PTHR30055	HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR	-	-	2	205	1.5E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.